Sequential Double IF Protocol

GUIDELINE

Double immunofluorescence is used to detect the presence and localization of two different proteins or antigens in a biological sample. It involves the use of two different fluorescently labeled antibodies, each targeting a specific protein or antigen of interest. By combining the two antibodies, researchers can visualize and study the distribution and co-localization of the two proteins in a cell, tissue, or organism. This technique is commonly used in research areas such as immunology, cell biology, and pathology. We provide a protocol for immunofluorescent double staining incubating the antibodies separately.

METHODS

Blocking and sequential incubation

  • First blocking step, incubate cells with the first serum (10% serum from the species that the secondary antibody was raised in) for 30 min to block unspecific binding of the antibodies (alternative blocking solutions are 1% gelatin or 1% BSA) at room temperature.
  • Incubate cells with the first primary antibody in 1% BSA or 1% serum in PBST in a humidified chamber for 1 hr at room temperature or overnight at 4°C depending on the concentration of the antibody and the accessibility of the antigen.
  • Decant the first primary antibody solution and wash the cells three times in PBS, 5 min each wash.
  • Incubate cells with first secondary antibody (labelled with Fluorochrome-1) in 1% BSA in PBST for 1 hr at room temperature in dark.
  • Decant the first secondary antibody solution and wash three times with PBS for 5 min each in dark.
  • Second blocking step, incubate cells with the second serum (10% serum from the species that the secondary antibody was raised in) for 30 min to block unspecific binding of the antibodies (alternative blocking solutions are 1% gelatin or 1% BSA) at room temperature in the dark.
  • Incubate cells with the second primary antibody in 1% BSA in PBST in a humidified chamber in the dark for 1 hr at room temperature or overnight at 4°C depending on the concentration of the antibody and the accessibility of the antigen.
  • Decant the second primary antibody solution and wash the cells three times in PBS, 5 min each wash in dark.
  • Incubate cells with second secondary antibody (labelled with Fluorochrome-2) in 1% BSA for 1 hr at room temperature in dark.
  • Decant the second secondary antibody solution and wash three times with PBS for 5 min each in dark.

Counter Staining

  • Incubate cells on 0.1-1 μg/ml Hoechst or DAPI (DNA stain) for 1 min in dark.
  • Rinse with PBS in dark.

Mounting

  • Mount coverslip with a drop of mounting medium.
  • Seal coverslip with nail polish to prevent drying and movement under microscope.
  • Store in dark at -20°C or 4°C.

NOTES

  • Choose two primary antibodies with different IgG isotypes. Either different subgroups from the same species or different species. Make sure you have the matching secondary fluorescence antibodies.
  • Procedure is done at room temperature except for microwaving steps.

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For research use only. Not for any other purpose.